diff options
Diffstat (limited to 'mpi/timing-study')
52 files changed, 280 insertions, 0 deletions
diff --git a/mpi/timing-study/output-1-1000-1000.txt b/mpi/timing-study/output-1-1000-1000.txt new file mode 100644 index 0000000..f500f74 --- /dev/null +++ b/mpi/timing-study/output-1-1000-1000.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 33.832562 +Clock time: 37.939663 diff --git a/mpi/timing-study/output-1-1000-1250.txt b/mpi/timing-study/output-1-1000-1250.txt new file mode 100644 index 0000000..f928063 --- /dev/null +++ b/mpi/timing-study/output-1-1000-1250.txt @@ -0,0 +1,11 @@ + +=================================================================================== += BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES += PID 21716 RUNNING AT kp013 += EXIT CODE: 11 += CLEANING UP REMAINING PROCESSES += YOU CAN IGNORE THE BELOW CLEANUP MESSAGES +=================================================================================== +YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Segmentation fault (signal 11) +This typically refers to a problem with your application. +Please see the FAQ page for debugging suggestions diff --git a/mpi/timing-study/output-1-1000-1500.txt b/mpi/timing-study/output-1-1000-1500.txt new file mode 100644 index 0000000..d31db96 --- /dev/null +++ b/mpi/timing-study/output-1-1000-1500.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 75.141736 +Clock time: 83.149478 diff --git a/mpi/timing-study/output-1-1000-1750.txt b/mpi/timing-study/output-1-1000-1750.txt new file mode 100644 index 0000000..6bbaf1f --- /dev/null +++ b/mpi/timing-study/output-1-1000-1750.txt @@ -0,0 +1,11 @@ + +=================================================================================== += BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES += PID 21837 RUNNING AT kp013 += EXIT CODE: 11 += CLEANING UP REMAINING PROCESSES += YOU CAN IGNORE THE BELOW CLEANUP MESSAGES +=================================================================================== +YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Segmentation fault (signal 11) +This typically refers to a problem with your application. +Please see the FAQ page for debugging suggestions diff --git a/mpi/timing-study/output-1-1000-2000.txt b/mpi/timing-study/output-1-1000-2000.txt new file mode 100644 index 0000000..3ba37f2 --- /dev/null +++ b/mpi/timing-study/output-1-1000-2000.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 132.636661 +Clock time: 145.001708 diff --git a/mpi/timing-study/output-1-1000-250.txt b/mpi/timing-study/output-1-1000-250.txt new file mode 100644 index 0000000..544de8e --- /dev/null +++ b/mpi/timing-study/output-1-1000-250.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 2.383001 +Clock time: 4.113476 diff --git a/mpi/timing-study/output-1-1000-500.txt b/mpi/timing-study/output-1-1000-500.txt new file mode 100644 index 0000000..dfa5abb --- /dev/null +++ b/mpi/timing-study/output-1-1000-500.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 8.793952 +Clock time: 9.832794 diff --git a/mpi/timing-study/output-1-1000-750.txt b/mpi/timing-study/output-1-1000-750.txt new file mode 100644 index 0000000..e1437a3 --- /dev/null +++ b/mpi/timing-study/output-1-1000-750.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 19.270078 +Clock time: 21.813069 diff --git a/mpi/timing-study/output-12-1000-1000.txt b/mpi/timing-study/output-12-1000-1000.txt new file mode 100644 index 0000000..2d1c3b3 --- /dev/null +++ b/mpi/timing-study/output-12-1000-1000.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 2.833550 +Clock time: 6.323680 diff --git a/mpi/timing-study/output-12-1000-1250.txt b/mpi/timing-study/output-12-1000-1250.txt new file mode 100644 index 0000000..5e8cbfb --- /dev/null +++ b/mpi/timing-study/output-12-1000-1250.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 4.347700 +Clock time: 9.178630 diff --git a/mpi/timing-study/output-12-1000-1500.txt b/mpi/timing-study/output-12-1000-1500.txt new file mode 100644 index 0000000..206bf6c --- /dev/null +++ b/mpi/timing-study/output-12-1000-1500.txt @@ -0,0 +1,11 @@ + +=================================================================================== += BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES += PID 23209 RUNNING AT kp013 += EXIT CODE: 11 += CLEANING UP REMAINING PROCESSES += YOU CAN IGNORE THE BELOW CLEANUP MESSAGES +=================================================================================== +YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Segmentation fault (signal 11) +This typically refers to a problem with your application. +Please see the FAQ page for debugging suggestions diff --git a/mpi/timing-study/output-12-1000-1750.txt b/mpi/timing-study/output-12-1000-1750.txt new file mode 100644 index 0000000..f2798ae --- /dev/null +++ b/mpi/timing-study/output-12-1000-1750.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 8.483342 +Clock time: 17.330302 diff --git a/mpi/timing-study/output-12-1000-2000.txt b/mpi/timing-study/output-12-1000-2000.txt new file mode 100644 index 0000000..165b598 --- /dev/null +++ b/mpi/timing-study/output-12-1000-2000.txt @@ -0,0 +1,11 @@ + +=================================================================================== += BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES += PID 23290 RUNNING AT kp013 += EXIT CODE: 11 += CLEANING UP REMAINING PROCESSES += YOU CAN IGNORE THE BELOW CLEANUP MESSAGES +=================================================================================== +YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Segmentation fault (signal 11) +This typically refers to a problem with your application. +Please see the FAQ page for debugging suggestions diff --git a/mpi/timing-study/output-12-1000-250.txt b/mpi/timing-study/output-12-1000-250.txt new file mode 100644 index 0000000..e4be53e --- /dev/null +++ b/mpi/timing-study/output-12-1000-250.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 0.198089 +Clock time: 2.217166 diff --git a/mpi/timing-study/output-12-1000-500.txt b/mpi/timing-study/output-12-1000-500.txt new file mode 100644 index 0000000..51bc78b --- /dev/null +++ b/mpi/timing-study/output-12-1000-500.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 0.735509 +Clock time: 2.513034 diff --git a/mpi/timing-study/output-12-1000-750.txt b/mpi/timing-study/output-12-1000-750.txt new file mode 100644 index 0000000..c9351f2 --- /dev/null +++ b/mpi/timing-study/output-12-1000-750.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 1.617002 +Clock time: 4.091923 diff --git a/mpi/timing-study/output-16-1000-1000.txt b/mpi/timing-study/output-16-1000-1000.txt new file mode 100644 index 0000000..4b98fae --- /dev/null +++ b/mpi/timing-study/output-16-1000-1000.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 2.106571 +Clock time: 7.500836 diff --git a/mpi/timing-study/output-16-1000-1250.txt b/mpi/timing-study/output-16-1000-1250.txt new file mode 100644 index 0000000..183314c --- /dev/null +++ b/mpi/timing-study/output-16-1000-1250.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 3.445883 +Clock time: 11.167682 diff --git a/mpi/timing-study/output-16-1000-1500.txt b/mpi/timing-study/output-16-1000-1500.txt new file mode 100644 index 0000000..a08be6f --- /dev/null +++ b/mpi/timing-study/output-16-1000-1500.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 4.741983 +Clock time: 16.777514 diff --git a/mpi/timing-study/output-16-1000-1750.txt b/mpi/timing-study/output-16-1000-1750.txt new file mode 100644 index 0000000..cd6757e --- /dev/null +++ b/mpi/timing-study/output-16-1000-1750.txt @@ -0,0 +1,8 @@ + +=================================================================================== += BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES += PID 34784 RUNNING AT kp160 += EXIT CODE: 11 += CLEANING UP REMAINING PROCESSES += YOU CAN IGNORE THE BELOW CLEANUP MESSAGES +=================================================================================== diff --git a/mpi/timing-study/output-16-1000-2000.txt b/mpi/timing-study/output-16-1000-2000.txt new file mode 100644 index 0000000..4bfa78c --- /dev/null +++ b/mpi/timing-study/output-16-1000-2000.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 8.301682 +Clock time: 28.791425 diff --git a/mpi/timing-study/output-16-1000-250.txt b/mpi/timing-study/output-16-1000-250.txt new file mode 100644 index 0000000..2f97b52 --- /dev/null +++ b/mpi/timing-study/output-16-1000-250.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 0.145483 +Clock time: 2.572587 diff --git a/mpi/timing-study/output-16-1000-500.txt b/mpi/timing-study/output-16-1000-500.txt new file mode 100644 index 0000000..adc146c --- /dev/null +++ b/mpi/timing-study/output-16-1000-500.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 0.570992 +Clock time: 3.899400 diff --git a/mpi/timing-study/output-16-1000-750.txt b/mpi/timing-study/output-16-1000-750.txt new file mode 100644 index 0000000..961b2a9 --- /dev/null +++ b/mpi/timing-study/output-16-1000-750.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 1.215016 +Clock time: 5.047125 diff --git a/mpi/timing-study/output-20-1000-250.txt b/mpi/timing-study/output-20-1000-250.txt new file mode 100644 index 0000000..e69de29 --- /dev/null +++ b/mpi/timing-study/output-20-1000-250.txt diff --git a/mpi/timing-study/output-24-1000-1000.txt b/mpi/timing-study/output-24-1000-1000.txt new file mode 100644 index 0000000..b1fd01d --- /dev/null +++ b/mpi/timing-study/output-24-1000-1000.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 1.414322 +Clock time: 9.439315 diff --git a/mpi/timing-study/output-24-1000-1250.txt b/mpi/timing-study/output-24-1000-1250.txt new file mode 100644 index 0000000..08acf8e --- /dev/null +++ b/mpi/timing-study/output-24-1000-1250.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 2.171989 +Clock time: 13.927639 diff --git a/mpi/timing-study/output-24-1000-1500.txt b/mpi/timing-study/output-24-1000-1500.txt new file mode 100644 index 0000000..e8452d5 --- /dev/null +++ b/mpi/timing-study/output-24-1000-1500.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 3.133675 +Clock time: 19.271850 diff --git a/mpi/timing-study/output-24-1000-1750.txt b/mpi/timing-study/output-24-1000-1750.txt new file mode 100644 index 0000000..9757c78 --- /dev/null +++ b/mpi/timing-study/output-24-1000-1750.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 4.398371 +Clock time: 25.650748 diff --git a/mpi/timing-study/output-24-1000-2000.txt b/mpi/timing-study/output-24-1000-2000.txt new file mode 100644 index 0000000..8fd3c60 --- /dev/null +++ b/mpi/timing-study/output-24-1000-2000.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 5.639865 +Clock time: 33.529967 diff --git a/mpi/timing-study/output-24-1000-250.txt b/mpi/timing-study/output-24-1000-250.txt new file mode 100644 index 0000000..e6ddcb7 --- /dev/null +++ b/mpi/timing-study/output-24-1000-250.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 0.100765 +Clock time: 2.412458 diff --git a/mpi/timing-study/output-24-1000-500.txt b/mpi/timing-study/output-24-1000-500.txt new file mode 100644 index 0000000..8f6af46 --- /dev/null +++ b/mpi/timing-study/output-24-1000-500.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 0.465147 +Clock time: 3.942927 diff --git a/mpi/timing-study/output-24-1000-750.txt b/mpi/timing-study/output-24-1000-750.txt new file mode 100644 index 0000000..1329b1b --- /dev/null +++ b/mpi/timing-study/output-24-1000-750.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 0.815429 +Clock time: 5.642879 diff --git a/mpi/timing-study/output-4-1000-1000.txt b/mpi/timing-study/output-4-1000-1000.txt new file mode 100644 index 0000000..14dc1e9 --- /dev/null +++ b/mpi/timing-study/output-4-1000-1000.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 8.467197 +Clock time: 11.707533 diff --git a/mpi/timing-study/output-4-1000-1250.txt b/mpi/timing-study/output-4-1000-1250.txt new file mode 100644 index 0000000..408cfeb --- /dev/null +++ b/mpi/timing-study/output-4-1000-1250.txt @@ -0,0 +1,11 @@ + +=================================================================================== += BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES += PID 22126 RUNNING AT kp013 += EXIT CODE: 11 += CLEANING UP REMAINING PROCESSES += YOU CAN IGNORE THE BELOW CLEANUP MESSAGES +=================================================================================== +YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Segmentation fault (signal 11) +This typically refers to a problem with your application. +Please see the FAQ page for debugging suggestions diff --git a/mpi/timing-study/output-4-1000-1500.txt b/mpi/timing-study/output-4-1000-1500.txt new file mode 100644 index 0000000..d304a5d --- /dev/null +++ b/mpi/timing-study/output-4-1000-1500.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 18.823087 +Clock time: 26.449810 diff --git a/mpi/timing-study/output-4-1000-1750.txt b/mpi/timing-study/output-4-1000-1750.txt new file mode 100644 index 0000000..ab98c94 --- /dev/null +++ b/mpi/timing-study/output-4-1000-1750.txt @@ -0,0 +1,11 @@ + +=================================================================================== += BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES += PID 22197 RUNNING AT kp013 += EXIT CODE: 11 += CLEANING UP REMAINING PROCESSES += YOU CAN IGNORE THE BELOW CLEANUP MESSAGES +=================================================================================== +YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Segmentation fault (signal 11) +This typically refers to a problem with your application. +Please see the FAQ page for debugging suggestions diff --git a/mpi/timing-study/output-4-1000-2000.txt b/mpi/timing-study/output-4-1000-2000.txt new file mode 100644 index 0000000..2c85e0c --- /dev/null +++ b/mpi/timing-study/output-4-1000-2000.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 33.274214 +Clock time: 45.841294 diff --git a/mpi/timing-study/output-4-1000-250.txt b/mpi/timing-study/output-4-1000-250.txt new file mode 100644 index 0000000..8b1fa3c --- /dev/null +++ b/mpi/timing-study/output-4-1000-250.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 0.599813 +Clock time: 2.807879 diff --git a/mpi/timing-study/output-4-1000-500.txt b/mpi/timing-study/output-4-1000-500.txt new file mode 100644 index 0000000..b3ce6ae --- /dev/null +++ b/mpi/timing-study/output-4-1000-500.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 2.212790 +Clock time: 4.133439 diff --git a/mpi/timing-study/output-4-1000-750.txt b/mpi/timing-study/output-4-1000-750.txt new file mode 100644 index 0000000..59aa17f --- /dev/null +++ b/mpi/timing-study/output-4-1000-750.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 4.830949 +Clock time: 6.854574 diff --git a/mpi/timing-study/output-8-1000-1000.txt b/mpi/timing-study/output-8-1000-1000.txt new file mode 100644 index 0000000..c063ee2 --- /dev/null +++ b/mpi/timing-study/output-8-1000-1000.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 4.226861 +Clock time: 7.517444 diff --git a/mpi/timing-study/output-8-1000-1250.txt b/mpi/timing-study/output-8-1000-1250.txt new file mode 100644 index 0000000..4be7ca8 --- /dev/null +++ b/mpi/timing-study/output-8-1000-1250.txt @@ -0,0 +1,11 @@ + +=================================================================================== += BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES += PID 22852 RUNNING AT kp013 += EXIT CODE: 11 += CLEANING UP REMAINING PROCESSES += YOU CAN IGNORE THE BELOW CLEANUP MESSAGES +=================================================================================== +YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Segmentation fault (signal 11) +This typically refers to a problem with your application. +Please see the FAQ page for debugging suggestions diff --git a/mpi/timing-study/output-8-1000-1500.txt b/mpi/timing-study/output-8-1000-1500.txt new file mode 100644 index 0000000..957fc99 --- /dev/null +++ b/mpi/timing-study/output-8-1000-1500.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 9.416485 +Clock time: 16.706325 diff --git a/mpi/timing-study/output-8-1000-1750.txt b/mpi/timing-study/output-8-1000-1750.txt new file mode 100644 index 0000000..8dbd945 --- /dev/null +++ b/mpi/timing-study/output-8-1000-1750.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 12.741221 +Clock time: 22.281683 diff --git a/mpi/timing-study/output-8-1000-2000.txt b/mpi/timing-study/output-8-1000-2000.txt new file mode 100644 index 0000000..9610e3f --- /dev/null +++ b/mpi/timing-study/output-8-1000-2000.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 16.578412 +Clock time: 26.921717 diff --git a/mpi/timing-study/output-8-1000-250.txt b/mpi/timing-study/output-8-1000-250.txt new file mode 100644 index 0000000..ca01ca3 --- /dev/null +++ b/mpi/timing-study/output-8-1000-250.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 0.296146 +Clock time: 2.211905 diff --git a/mpi/timing-study/output-8-1000-500.txt b/mpi/timing-study/output-8-1000-500.txt new file mode 100644 index 0000000..3e3b83c --- /dev/null +++ b/mpi/timing-study/output-8-1000-500.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 1.111486 +Clock time: 2.710176 diff --git a/mpi/timing-study/output-8-1000-750.txt b/mpi/timing-study/output-8-1000-750.txt new file mode 100644 index 0000000..4a98753 --- /dev/null +++ b/mpi/timing-study/output-8-1000-750.txt @@ -0,0 +1,4 @@ + +===Timing=== +Time computing life: 2.419305 +Clock time: 4.675962 diff --git a/mpi/timing-study/slurm-10870703.err-kp013 b/mpi/timing-study/slurm-10870703.err-kp013 new file mode 100644 index 0000000..4bdaa5d --- /dev/null +++ b/mpi/timing-study/slurm-10870703.err-kp013 @@ -0,0 +1,11 @@ +mkdir: cannot create directory ‘timing-study’: File exists +[proxy:0:0@kp013] HYD_pmcd_pmip_control_cmd_cb (../../../../../../srcdir/mpich/3.2.1/src/pm/hydra/pm/pmiserv/pmip_cb.c:887): assert (!closed) failed +[proxy:0:0@kp013] HYDT_dmxu_poll_wait_for_event (../../../../../../srcdir/mpich/3.2.1/src/pm/hydra/tools/demux/demux_poll.c:76): callback returned error status +[proxy:0:0@kp013] main (../../../../../../srcdir/mpich/3.2.1/src/pm/hydra/pm/pmiserv/pmip.c:202): demux engine error waiting for event +srun: error: kp013: task 0: Exited with exit code 7 +[mpiexec@kp013] HYDT_bscu_wait_for_completion (../../../../../../srcdir/mpich/3.2.1/src/pm/hydra/tools/bootstrap/utils/bscu_wait.c:76): one of the processes terminated badly; aborting +[mpiexec@kp013] HYDT_bsci_wait_for_completion (../../../../../../srcdir/mpich/3.2.1/src/pm/hydra/tools/bootstrap/src/bsci_wait.c:23): launcher returned error waiting for completion +[mpiexec@kp013] HYD_pmci_wait_for_completion (../../../../../../srcdir/mpich/3.2.1/src/pm/hydra/pm/pmiserv/pmiserv_pmci.c:218): launcher returned error waiting for completion +[mpiexec@kp013] main (../../../../../../srcdir/mpich/3.2.1/src/pm/hydra/ui/mpich/mpiexec.c:340): process manager error waiting for completion +srun: error: Unable to create step for job 10870703: Job/step already completing or completed +slurmstepd: error: *** JOB 10870703 ON kp013 CANCELLED AT 2021-12-08T01:29:02 DUE TO TIME LIMIT *** diff --git a/mpi/timing-study/slurm-10870703.out-kp013 b/mpi/timing-study/slurm-10870703.out-kp013 new file mode 100644 index 0000000..e69de29 --- /dev/null +++ b/mpi/timing-study/slurm-10870703.out-kp013 diff --git a/mpi/timing-study/timing_study.sh b/mpi/timing-study/timing_study.sh new file mode 100644 index 0000000..04b64ff --- /dev/null +++ b/mpi/timing-study/timing_study.sh @@ -0,0 +1,24 @@ +#!/bin/bash +#SBATCH --time=0:10:00 # walltime, abbreviated by -t +#SBATCH --nodes=2 # number of cluster nodes, abbreviated by -N +#SBATCH -o slurm-%j.out-%N # name of the stdout, using the job number (%j) and the first node (%N) +#SBATCH -e slurm-%j.err-%N # name of the stderr, using job and first node values +#SBATCH --ntasks=24 # number of MPI tasks, abbreviated by -n +# additional information for allocated clusters +#SBATCH --account=usucs5030 # account - abbreviated by -A +#SBATCH --partition=kingspeak # partition, abbreviated by -p + +cd $HOME/gol/mpi +mkdir timing-study + +module load intel mpich + +iterations=1000 + +for cores in 1 4 8 12 16 20 #24 +do + for size in 250 500 750 1000 1250 1500 1750 2000 + do + mpirun -np $cores ./gol simulate random $size $size $iterations 1 > timing-study/output-$cores-$iterations-$size.txt + done +done |